Source: ALL
Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 23583
Gene Symbol: SMUG1
SMUG1
0.100 Biomarker group BEFREE [<sup>18</sup>F]FB-GAcDb immunoPET was further evaluated in a disseminated lymphoma (A20-hCD20) syngeneic for hCD20TM and compared to [<sup>18</sup>F]FDG PET. 30456475 2019
Entrez Id: 574452
Gene Symbol: MIR494
MIR494
0.010 Biomarker group BEFREE YT and NK92 cells derived from NK cell lymphomas were used. miR-494-3p inhibited PTEN with secondary activation of AKT in NK92 cells, and miR-142-3p inhibited RICTOR, a key component of the mTOR complex, with secondary suppression of AKT in YT cells. 25907832 2015
Entrez Id: 84061
Gene Symbol: MAGT1
MAGT1
0.160 GeneticVariation group BEFREE XMEN disease (X-linked immunodeficiency with Magnesium defect, Epstein-Barr virus infection and Neoplasia) is a novel primary immune deficiency caused by mutations in MAGT1 and characterised by chronic infection with Epstein-Barr virus (EBV), EBV-driven lymphoma, CD4 T-cell lymphopenia, and dysgammaglobulinemia [1]. 25504528 2015
Entrez Id: 4068
Gene Symbol: SH2D1A
SH2D1A
0.470 Biomarker group BEFREE X-linked lymphoproliferative syndrome (XLP or Duncan disease) is characterized by extreme sensitivity to Epstein-Barr virus (EBV), resulting in a complex phenotype manifested by severe or fatal infectious mononucleosis, acquired hypogammaglobulinemia and malignant lymphoma. 9771704 1998
Entrez Id: 268
Gene Symbol: AMH
AMH
0.020 Biomarker group BEFREE Women with lymphoma and leukaemia have been shown to have reduced AMH concentrations, but it is unknown if the FD is also reduced. 31782794 2019
Entrez Id: 201294
Gene Symbol: UNC13D
UNC13D
0.010 GeneticVariation group BEFREE Within 2 epidemiological screening programs in northern Sweden, an area demonstrating a founder effect of this specific UNC13D mutation, all individuals with a diagnosis of lymphoma (487 patients) and matched controls (1844 controls) were assessed using polymerase chain reaction for carrier status. 30758854 2019
Entrez Id: 6774
Gene Symbol: STAT3
STAT3
0.200 AlteredExpression group BEFREE With the use of BTK and STAT3 inhibitors to treat B cell lymphomas in clinical trials, these findings highlight the possibility of using new pharmaceutical approaches to treat EBV-associated lymphomas that express LMP2A. 27792904 2017
Entrez Id: 695
Gene Symbol: BTK
BTK
0.100 AlteredExpression group BEFREE With the use of BTK and STAT3 inhibitors to treat B cell lymphomas in clinical trials, these findings highlight the possibility of using new pharmaceutical approaches to treat EBV-associated lymphomas that express LMP2A. 27792904 2017
Entrez Id: 931
Gene Symbol: MS4A1
MS4A1
0.200 AlteredExpression group BEFREE With the exception of some lymphoblastic lymphomas, high-grade B-cell lymphomas normally expressed the pan B-cell antigens CD19 and CD22 but only immunoblastic lymphomas consistently expressed the pan B marker CD20. 3509751 1987
Entrez Id: 54474
Gene Symbol: KRT20
KRT20
0.100 AlteredExpression group BEFREE With the exception of some lymphoblastic lymphomas, high-grade B-cell lymphomas normally expressed the pan B-cell antigens CD19 and CD22 but only immunoblastic lymphomas consistently expressed the pan B marker CD20. 3509751 1987
Entrez Id: 933
Gene Symbol: CD22
CD22
0.090 AlteredExpression group BEFREE With the exception of some lymphoblastic lymphomas, high-grade B-cell lymphomas normally expressed the pan B-cell antigens CD19 and CD22 but only immunoblastic lymphomas consistently expressed the pan B marker CD20. 3509751 1987
Entrez Id: 3662
Gene Symbol: IRF4
IRF4
0.100 GeneticVariation group BEFREE With the exception of pediatric follicular lymphoma with IRF4-translocation, the genetic events associated with these lymphomas have not yet been defined. 23445872 2013
Entrez Id: 23111
Gene Symbol: SPART
SPART
0.010 Biomarker group BEFREE With the exception of a single tumor sample, a correct prediction of lymphoma or normal sample was made in a blinded analysis of the validation series using a combination of SNCA and SPG20. 24362313 2014
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
0.020 Biomarker group BEFREE With the exception of a single tumor sample, a correct prediction of lymphoma or normal sample was made in a blinded analysis of the validation series using a combination of SNCA and SPG20. 24362313 2014
Entrez Id: 2212
Gene Symbol: FCGR2A
FCGR2A
0.020 GeneticVariation group BEFREE With rituximab, FCGR3A and FCGR2A high-affinity polymorphisms have been associated with clinical response in lymphoma but not in CLL, suggesting potential divergent mechanisms of action between these 2 diseases. 15217834 2005
Entrez Id: 2214
Gene Symbol: FCGR3A
FCGR3A
0.030 Biomarker group BEFREE With rituximab, FCGR3A and FCGR2A high-affinity polymorphisms have been associated with clinical response in lymphoma but not in CLL, suggesting potential divergent mechanisms of action between these 2 diseases. 15217834 2005
Entrez Id: 28402
Gene Symbol: IGHV3-69-1
IGHV3-69-1
0.100 Biomarker group BEFREE With one possible exception, none of these lymphoma VH sequences appear to represent any of the VH3 genes that may be preferentially used in the fetal repertoire. 1909196 1991
Entrez Id: 6545
Gene Symbol: SLC7A4
SLC7A4
0.010 Biomarker group BEFREE With one possible exception, none of these lymphoma VH sequences appear to represent any of the VH3 genes that may be preferentially used in the fetal repertoire. 1909196 1991
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.100 Biomarker group BEFREE With limited sample size, gradient boosting can differentiate endophthalmitis from uveitis and lymphoma by IL-6 and IL-10 with high sensitivity and specificity; however, a larger cohort is needed for further validation. 28157416 2017
Entrez Id: 3569
Gene Symbol: IL6
IL6
0.100 Biomarker group BEFREE With limited sample size, gradient boosting can differentiate endophthalmitis from uveitis and lymphoma by IL-6 and IL-10 with high sensitivity and specificity; however, a larger cohort is needed for further validation. 28157416 2017
Entrez Id: 4615
Gene Symbol: MYD88
MYD88
0.500 GeneticVariation group BEFREE With clinical trials regarding their efficacy rapidly expanding to NHLs, we also discuss potential combinations of immune checkpoint inhibitors with the described targeted chemotherapies of L265P signaling networks, and/or with the above immunological approaches as potential ways of targeting MYD88-mutated lymphomas in the future. 30203262 2018
Entrez Id: 23583
Gene Symbol: SMUG1
SMUG1
0.100 Biomarker group BEFREE Whole-body MRI versus <sup>18</sup>F-FDG PET/CT for pretherapeutic assessment and staging of lymphoma: a meta-analysis. 29950864 2018
Entrez Id: 238
Gene Symbol: ALK
ALK
0.100 AlteredExpression group BEFREE Whilst the strong labelling for phosphotyrosine observed in the lymphoma cells is due to the presence of activated ALK, the strong staining of some normal cells presumably represents physiologically active kinases and this should be taken into account when interpreting the immunostaining of non-lymphoid tumours. 10398126 1999
Entrez Id: 200081
Gene Symbol: TXLNA
TXLNA
0.020 Biomarker group BEFREE While serum BAFF was negatively associated with the presence of both traditional anti-SSA/Ro and novel TSA antibodies in GI lymphoma patient, IL14 was positively associated with the presence of both traditional anti-SSA/Ro and novel TSA antibodies in non-GI lymphoma patient. 30766889 2019
Entrez Id: 943
Gene Symbol: TNFRSF8
TNFRSF8
0.100 Biomarker group BEFREE While our understanding of the biology of CD30 in lymphoma continues to evolve, our need to detect and measure its expression at the protein level remains critically important for diagnosis and patient care. 31567279 2020